You can not select more than 25 topics
Topics must start with a letter or number, can include dashes ('-') and can be up to 35 characters long.
133 lines
5.7 KiB
133 lines
5.7 KiB
// Code generated by protoc-gen-go. DO NOT EDIT.
|
|
// source: google/genomics/v1/readgroupset.proto
|
|
|
|
package genomics
|
|
|
|
import proto "github.com/golang/protobuf/proto"
|
|
import fmt "fmt"
|
|
import math "math"
|
|
import _ "google.golang.org/genproto/googleapis/api/annotations"
|
|
import google_protobuf3 "github.com/golang/protobuf/ptypes/struct"
|
|
|
|
// Reference imports to suppress errors if they are not otherwise used.
|
|
var _ = proto.Marshal
|
|
var _ = fmt.Errorf
|
|
var _ = math.Inf
|
|
|
|
// A read group set is a logical collection of read groups, which are
|
|
// collections of reads produced by a sequencer. A read group set typically
|
|
// models reads corresponding to one sample, sequenced one way, and aligned one
|
|
// way.
|
|
//
|
|
// * A read group set belongs to one dataset.
|
|
// * A read group belongs to one read group set.
|
|
// * A read belongs to one read group.
|
|
//
|
|
// For more genomics resource definitions, see [Fundamentals of Google
|
|
// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics)
|
|
type ReadGroupSet struct {
|
|
// The server-generated read group set ID, unique for all read group sets.
|
|
Id string `protobuf:"bytes,1,opt,name=id" json:"id,omitempty"`
|
|
// The dataset to which this read group set belongs.
|
|
DatasetId string `protobuf:"bytes,2,opt,name=dataset_id,json=datasetId" json:"dataset_id,omitempty"`
|
|
// The reference set to which the reads in this read group set are aligned.
|
|
ReferenceSetId string `protobuf:"bytes,3,opt,name=reference_set_id,json=referenceSetId" json:"reference_set_id,omitempty"`
|
|
// The read group set name. By default this will be initialized to the sample
|
|
// name of the sequenced data contained in this set.
|
|
Name string `protobuf:"bytes,4,opt,name=name" json:"name,omitempty"`
|
|
// The filename of the original source file for this read group set, if any.
|
|
Filename string `protobuf:"bytes,5,opt,name=filename" json:"filename,omitempty"`
|
|
// The read groups in this set. There are typically 1-10 read groups in a read
|
|
// group set.
|
|
ReadGroups []*ReadGroup `protobuf:"bytes,6,rep,name=read_groups,json=readGroups" json:"read_groups,omitempty"`
|
|
// A map of additional read group set information.
|
|
Info map[string]*google_protobuf3.ListValue `protobuf:"bytes,7,rep,name=info" json:"info,omitempty" protobuf_key:"bytes,1,opt,name=key" protobuf_val:"bytes,2,opt,name=value"`
|
|
}
|
|
|
|
func (m *ReadGroupSet) Reset() { *m = ReadGroupSet{} }
|
|
func (m *ReadGroupSet) String() string { return proto.CompactTextString(m) }
|
|
func (*ReadGroupSet) ProtoMessage() {}
|
|
func (*ReadGroupSet) Descriptor() ([]byte, []int) { return fileDescriptor8, []int{0} }
|
|
|
|
func (m *ReadGroupSet) GetId() string {
|
|
if m != nil {
|
|
return m.Id
|
|
}
|
|
return ""
|
|
}
|
|
|
|
func (m *ReadGroupSet) GetDatasetId() string {
|
|
if m != nil {
|
|
return m.DatasetId
|
|
}
|
|
return ""
|
|
}
|
|
|
|
func (m *ReadGroupSet) GetReferenceSetId() string {
|
|
if m != nil {
|
|
return m.ReferenceSetId
|
|
}
|
|
return ""
|
|
}
|
|
|
|
func (m *ReadGroupSet) GetName() string {
|
|
if m != nil {
|
|
return m.Name
|
|
}
|
|
return ""
|
|
}
|
|
|
|
func (m *ReadGroupSet) GetFilename() string {
|
|
if m != nil {
|
|
return m.Filename
|
|
}
|
|
return ""
|
|
}
|
|
|
|
func (m *ReadGroupSet) GetReadGroups() []*ReadGroup {
|
|
if m != nil {
|
|
return m.ReadGroups
|
|
}
|
|
return nil
|
|
}
|
|
|
|
func (m *ReadGroupSet) GetInfo() map[string]*google_protobuf3.ListValue {
|
|
if m != nil {
|
|
return m.Info
|
|
}
|
|
return nil
|
|
}
|
|
|
|
func init() {
|
|
proto.RegisterType((*ReadGroupSet)(nil), "google.genomics.v1.ReadGroupSet")
|
|
}
|
|
|
|
func init() { proto.RegisterFile("google/genomics/v1/readgroupset.proto", fileDescriptor8) }
|
|
|
|
var fileDescriptor8 = []byte{
|
|
// 367 bytes of a gzipped FileDescriptorProto
|
|
0x1f, 0x8b, 0x08, 0x00, 0x00, 0x00, 0x00, 0x00, 0x02, 0xff, 0x7c, 0x91, 0x4f, 0x8b, 0xdb, 0x30,
|
|
0x10, 0xc5, 0xb1, 0xf3, 0xa7, 0xcd, 0xa4, 0x84, 0x54, 0x87, 0x62, 0x4c, 0x03, 0x21, 0x50, 0x08,
|
|
0x3d, 0xc8, 0x4d, 0x7a, 0x29, 0x29, 0xe4, 0x10, 0x28, 0x25, 0xb0, 0x87, 0x60, 0xc3, 0x1e, 0xf6,
|
|
0x12, 0x14, 0x7b, 0x6c, 0xc4, 0x3a, 0x92, 0x91, 0xe4, 0x40, 0xbe, 0xf3, 0x7e, 0x80, 0x3d, 0x2e,
|
|
0x96, 0xff, 0x10, 0xd8, 0x25, 0xb7, 0xd1, 0xd3, 0xef, 0x8d, 0x46, 0x6f, 0xe0, 0x47, 0x26, 0x65,
|
|
0x96, 0x63, 0x90, 0xa1, 0x90, 0x67, 0x1e, 0xeb, 0xe0, 0xb2, 0x0a, 0x14, 0xb2, 0x24, 0x53, 0xb2,
|
|
0x2c, 0x34, 0x1a, 0x5a, 0x28, 0x69, 0x24, 0x21, 0x35, 0x46, 0x5b, 0x8c, 0x5e, 0x56, 0xfe, 0xf7,
|
|
0xc6, 0xca, 0x0a, 0x1e, 0x30, 0x21, 0xa4, 0x61, 0x86, 0x4b, 0xa1, 0x6b, 0x87, 0xbf, 0xb8, 0xd7,
|
|
0xb8, 0x61, 0xda, 0x0e, 0xf6, 0x74, 0x2a, 0xd3, 0x40, 0x1b, 0x55, 0xc6, 0xcd, 0x9b, 0x8b, 0x17,
|
|
0x17, 0xbe, 0x84, 0xc8, 0x92, 0xff, 0x95, 0x23, 0x42, 0x43, 0x26, 0xe0, 0xf2, 0xc4, 0x73, 0xe6,
|
|
0xce, 0x72, 0x14, 0xba, 0x3c, 0x21, 0x33, 0x80, 0x84, 0x19, 0xa6, 0xd1, 0x1c, 0x79, 0xe2, 0xb9,
|
|
0x56, 0x1f, 0x35, 0xca, 0x3e, 0x21, 0x4b, 0x98, 0x2a, 0x4c, 0x51, 0xa1, 0x88, 0xf1, 0xd8, 0x40,
|
|
0x3d, 0x0b, 0x4d, 0x3a, 0x3d, 0xb2, 0x24, 0x81, 0xbe, 0x60, 0x67, 0xf4, 0xfa, 0xf6, 0xd6, 0xd6,
|
|
0xc4, 0x87, 0xcf, 0x29, 0xcf, 0xd1, 0xea, 0x03, 0xab, 0x77, 0x67, 0xb2, 0x85, 0x71, 0xf5, 0x95,
|
|
0x63, 0x1d, 0x92, 0x37, 0x9c, 0xf7, 0x96, 0xe3, 0xf5, 0x8c, 0xbe, 0xcf, 0x88, 0x76, 0xf3, 0x87,
|
|
0xa0, 0xda, 0x52, 0x93, 0x2d, 0xf4, 0xb9, 0x48, 0xa5, 0xf7, 0xc9, 0x1a, 0x7f, 0xde, 0x35, 0x46,
|
|
0x68, 0xe8, 0x5e, 0xa4, 0xf2, 0x9f, 0x30, 0xea, 0x1a, 0x5a, 0x9f, 0x1f, 0xc1, 0xa8, 0x93, 0xc8,
|
|
0x14, 0x7a, 0xcf, 0x78, 0x6d, 0x62, 0xa9, 0x4a, 0xf2, 0x0b, 0x06, 0x17, 0x96, 0x97, 0x68, 0x23,
|
|
0x19, 0xaf, 0xfd, 0xb6, 0x7f, 0x1b, 0x33, 0x7d, 0xe0, 0xda, 0x3c, 0x56, 0x44, 0x58, 0x83, 0x1b,
|
|
0xf7, 0x8f, 0xb3, 0xcb, 0xe1, 0x5b, 0x2c, 0xcf, 0x1f, 0xcc, 0xb2, 0xfb, 0x7a, 0x3b, 0xcc, 0xa1,
|
|
0x6a, 0x72, 0x70, 0x9e, 0x36, 0x2d, 0x28, 0x73, 0x26, 0x32, 0x2a, 0x55, 0x56, 0xad, 0xda, 0x3e,
|
|
0x11, 0xd4, 0x57, 0xac, 0xe0, 0xfa, 0x76, 0xfd, 0x7f, 0xdb, 0xfa, 0xd5, 0x71, 0x4e, 0x43, 0x4b,
|
|
0xfe, 0x7e, 0x0b, 0x00, 0x00, 0xff, 0xff, 0x1f, 0xa9, 0x2f, 0xa5, 0x80, 0x02, 0x00, 0x00,
|
|
}
|